Sungmin Rhee


International Papers

  • Lim S, Lee S, Jung I, Rhee S, Kim S. Comprehensive and critical evaluation of individualized pathway activity measurement tools on pan-cancer data. Briefings in Bioinformatics. 2018 Nov. In press.
  • Rhee S, Seo S, Kim S. Hybrid Approach of Relation Network and Localized Graph Convolutional Filtering for Breast Cancer Subtype Classification. International Joint Conference on Artificial Intelligence (IJCAI). 2018 July.
  • Ahn H, Jung I, Shin SJ, Park J, Rhee S, Kim JK, Jung W, Kwon HB, Kim S. Transcriptional Network Analysis Reveals Drought Resistance Mechanisms of AP2/ERF Transgenic Rice. Front Plant Sci. 2017 Jun 15
  • Oh M, Rhee S, Moon JH, Chae H, Lee S, Kang J, Kim S, Literature-based condition-specific miRNA-mRNA target prediction. PLoS ONE. 2017 Mar 31
  • Rhee S, Lim S, Kim S, Iterative segmented least square method for functional microRNA-mRNA module discovery in breast cancer. International Journal of Data Mining and Bioinformatics
  • Shin SJ, Ahn H, Jung I, Rhee S, Kim S, Kwon HB, Novel drought-responsive regulatory coding and non-coding transcripts from Oryza Sativa L. Genes & Genomics. 2016 June 9.
  • Park J, Hur B, Rhee S, Lim S, Kim MS, Kim K, Han W, Kim S. Information theoretic sub-network mining characterizes breast cancer subtypes in terms of cancer core mechanisms. J Bioinform Comput Biol. 2016 Oct;14(5):1644002.
  • Rhee S, Chae H, Kim S. PlantMirnaT: miRNA and mRNA integrated analysis fully utilizing characteristics of plant sequencing data. Methods. 2015 Jul 15;83:80-7.
  • Chae H, Rhee SM, Nephew KP, Kim S. BioVLAB-MMIA-NGS: MicroRNA-mRNA integrated analysis using high throughput sequencing data. Bioinformatics, 2014.
  • Rhee SM, Park JW, and Kim S. Computational regulatory network construction from microRNA and transcription factor perspectives. ACM SIG Bio Record, Volume 3, Issue 3, May 2013 ISSN 2159-1210.
  • An JH, Kim KS, Rhee SM, Chae HJ, Nephew KP, Kim S. Genome-wide analysis and modeling of DNA methylation susceptibility in 30 breast cancer cell lines by using CpG flanking sequences. Journal of Bioinformatics and Computational Biology. 2013 Jun;11(3):1341003. doi: 10.1142/S0219720013410035.
  • Pejaver VR, An J, Rhee SM, Bhan A, Choi JH, Liu B, Lee H, Brown PJ, Kysela D, Brun YV, Kim S. GeneclusterViz: a tool for conserved gene cluster visualization, exploration and analysis, Bioinformatics, 2012, 28(11), 1527-1529.

Conference Papers

  • Rhee S, Lim S, Kim S, Iterative segmented least square method for functional microRNA-mRNA module discovery in breast cancer. 2016 IEEE International Conference On Bioinformatics and Biomedicine (BIBM 2016), Shenzhen, China