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International Papers

• Park S, Lee D, Kim Y, Lim S, Chae H, Kim S. BioVLAB-Cancer-Pharmacogenomics: Tumor Heterogeneity and Pharmacogenomics Analysis of Multi-omics Data from Tumor on the Cloud. Bioinformatics. 2021 June 29.
• Ahn H, Jung I, Chae H, Oh M, Kim I, Kim S. IDEA: Integrating Divisive and Ensemble-Agglomerate hierarchical clustering framework for arbitrary shape data. 2021 IEEE International Conference on Big Data (Big Data). 8th Annual Workshop on Big Data Analytic Technology for Bioinformatics and Health Informatics (KDDBHI), 2021. Accepted.
• Oh M, Park S, Kim S, Chae H. Machine learning-based analysis of multi-omics data on the cloud for investigating gene regulations. Briefings in Bioinformatics, 2020 Mar 30.
• Kim HJ, Moon JH, Shin JS, Kim B, Kim JS, Yoon IH, Min BH, Kim JM, Kang SJ, Kim YH, Jo K, Choi J, Chae H, Lee WW, Kim S, Park CG. Bioinformatics analyses with peripheral blood RNA-sequencing unveiled the cause of the graft loss after pig-to-nonhuman primate islet xenotransplantation model. Scientific Reports. 2019 Dec 11
• Ahn H, Jung I, Chae H, Kang D, Jung W, Kim S. HTRgene: a computational method to perform the integrated analysis of multiple heterogeneous time-series data: case analysis of cold and heat stress response signaling genes in Arabidopsis. BMC Bioinformatics, 2019 Dec 2.
• Choi J, Park Y, Kim S, Chae H. CloudBS: A MapReducebased bisulfite sequencing aligner on cloud. Journal of Bioinformatics and Computational Biology. 2018 Dec 19.
• Seo S, Park Y, Chae H. BiSpark: a Spark-based highly scalable aligner for bisulfite sequencing data. BMC Bioinformatics. 2018 Dec 10.

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Conference Papers

• Ahn H, Chae H, Kim S, Integration of heterogeneous time series gene expression data by clustering on time dimension, 2017 IEEE International Conference on Big Data and Smart Computing (BigComp 2017)

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Visiting student ~ Feburary 2017